Culturomics: Word play : Nature News

“The point is this: like people, ideas need a social life. Introduce them to your friends. Help them develop good contacts. It’s worth it: more than any accolade or discovery, you get the pleasure of hanging out with ideas and with friends.”

A comment by Erez Lieberman-Aiden on an article about him and his research and life. A very interesting and inspiring profile of Erez and his wife, Aviva. Erez is playful, disregards organizational and academic boundaries, and had incredible drive. He’s already done so much and I wouldn’t be surprised as to what he comes up with or ends up doing over his next 3 decades. This article is a must-read.

Read this article…

PhD Comics: The Movie

I doubt there’s a grad student, past, current, or future, who doesn’t like PhD Comics. It’s a great comic take on academic research life with a few sidebars of interesting stories in science that the writer shares.

Testament to the following, there’s now a movie:

“Piled Higher and Deeper” The Movie is a live-action adaptation of the popular online comic strip by Jorge Cham (www.phdcomics.com). It was filmed on location at and was produced in partnership with the California Institute of Technology (Caltech).

For those of us in the Boston/Cambridge area, there seem to be two screening tentatively planned – MIT and Harvard. Though no details that I’ve found yet (will look harder).

In the mean time, here’s the trailer:

PHD Movie Trailer from PHD Comics on Vimeo.

Lucky find in Charlestown saves whaler’s restoration – The Boston Globe

“For the antiquarian shipbuilders who are painstakingly restoring the world’s only surviving wooden whale ship here, an essential ingredient can be very hard to find: lumber that’s big enough and strong enough for a massive 19th- century seafaring vessel, and cheap enough for a restoration project’s budget. Restorers of the Charles W. Morgan at Mystic Seaport had relied on fallen live and white oak trees from the Deep South, where hurricanes like Hugo and Katrina had uprooted many. But supplies were running low last June and officials wondered where they would find more. Then construction crews working in Charlestown made an accidental and historic discovery.”

Reminds me of the oak beam story from New College in Oxford, UK.

Read this article…

The Rise of Backyard Biotech – Magazine – The Atlantic

“The small industries and biotech freelancers springing up are, in some ways, like the divisions of the old behemoth drug company, but connected only by the tendrils of the Internet, and the relationships that grow so easily there. Rienhoff is contemporary biotech’s answer to the lost Renaissance man. He pulls the renaissance effect out of the network around him, using the terrible complexity of the global community to fight the terrible complexity of disease. It’s the way science ought to work.”

An interesting, if “anemic” article, on FerroKin, a virtual drug company developing chelating agents to treat excess iron due to blood transfusions (fixing the fix, I guess).

This is the second virtual drug developer I have hear about. In hi-tech, virtual programs managers are common, developing products across different companies – coder, hardware design, production, distribution. No reason to think that can’t be done in biotech. Especially with all the communication tools available.

Read this article…

Bill Gates Funds Human Waste To Biofuel Project In Ghana | Fast Company

“Developing countries lack both clean water and clean energy sources. By converting soiled water into energy and clean water, a new project could wipe away both problems.”

Every since an organic waste conference I attended a few months ago, I’ve had anaerobic digestors on the mind – for farm, for municipal waste to energy, even for small-scale home systems. Decomposition of poop is an ancient process and we’re just ignoring it and pissing away the benefits. In a smaller and smarter planet, we’re going to have to take more control of the whole organics process – from food, to distribution, to waste, to energy and fertilizer. [I sense a new brainwave coming on…]

Read this article…

Pause for station identification

I’ve got a new gig (read the announcement) and need to update my usual disclaimer.

Data and bugs
My name is Charlie Schick. I am Director of Marketing, Public Sector at Netezza, an IBM company (read the announcement). I am also a determined practical microbiologist with a wide range of interests (listed in part on my About page).

What happens here?
I haven’t been as prolific as in the old days. Also, I am sure I irritated everyone with site changes in the past months (moved to new hosted platform). So if you’re still reading this site, thanks a ton for still thinking I have something of value for you. I hope at least that I have expanded your mind as I travel into cutting edge areas in biology and data.

Standard Disclaimer (riffing off of Cringley)
Everything I write here on this site is an expression of my own opinions, NOT of my employer, IBM. If these were the opinions of IBM, the site would be called ‘IBM something’ and, for sure, the writing and design would be much more professional. Likewise, I am an intensely trained professional writer :-P, so don’t expect to find any confidential secret corporate mumbo-jumbo being revealed here. Everything I write here is public info or readily found via any decent search engine or easily deduced by someone who has an understanding of the industry.

On the flip side, this is my personal site. Please don’t flood me with ideas that you think IBM might be interested in. There are other channels for such biz dev, and this site is not part of them.

The end of my regular commute into Boston – how much did it cost me?

For the past 22 months I have commuted daily 30 miles each way to work (excepting holidays and storms, of course). If the railway were as efficient and pleasant as I had grown accustomed to while living in Europe, then maybe I wouldn’t really care. But in the end, the commute sapped my time, motivation, and sanity.

While I didn’t keep any sort of accurate records of each of my commutes, I can guess how many I did, how much it cost, and how far the commute was. My commute was mostly by train from my home station, but occasionally I drove to another station or all the way into work.

Here’s my final tally:

  • 22 months commuting
  • 1,500 hours sitting in a car or train
  • $6,500 in tolls, parking, rail passes, gas
  • 10,200 miles driving (to station, to town)
  • 20,000 miles on train
  • more than 800 miles walking (to and from station, including extended out of the way walks)
  • New stat (28may11): gained about 15 lbs

On the train inbound I usually had a table to work on. Outbound I usually stood (probably a total of 300 hours!), so really could only read. I read the Economist (95 weeks of it), read a few books, read a ton of science papers and articles printed out for the ride home, wrote and replied to countless emails, wrote dozens of blog posts, and spent many hours on Twitter.

In the car, I listened to more than 200 hours (practically every driving moment) of Science Friday, NOVA, Long Now seminars, and Melvyn Bragg’s In our Time, and gathered enough wool to clothe China. Sigh.

While the commute to my new job is quite short – a round trip less than 3 miles, 10 minutes by car – I can’t say how long it may last. Also, in my job that’s ending, there was no inter-city travel (only two trips, to Austin). Day 1 in my new job already starts with a 320 mile round trip to HQ and back. And I am sure I’ll need to do at least 20% traveling, so I’ll rack on miles and more wear on me (though probably not like my weekly London commutes back in 2007). But, for sure, any travel will be a different sort than a daily rail commute.

One thing I’ll miss from my commute: my extended 35-40 min walk down Bolyston and through the Fens.

I hope I use my new-found time and money wisely. For example, one goal is to get back into running. The long commute required I leave home early and arrive back late – not conducive to a regular running schedule out here in our semi-rural suburbs without lighting and sidewalks.

Let’s see.